> Sites like www.example.com allows you to change the
> layout of the website and save the settings in a cookie. 
> Unfortunately the cookie will only works when viewing the
> website in IE or Firefox.  Any trick to make it work in
> HTTrack ?
Create a new project, but don't start it (select "save" in the last pannel).
Then, copy the corresponding cookie (cookies.txt or the IE cookie) in the
newly created folder. Restart httrack and run the mirror - it should do the
trick.