I asked 2 questions and you didn't answer them, so you're not going to get much
help.

> URL is to an internal wiki site, yes I have

www.site.org and site.org are different and httrack by default stays on the
original site. So what is the captured url and what are the links on the
captured page?
> filtering enabled for everything.

Did you filter out the log-out url, like I asked?