William, I somewhat understand what you are asking of me, and I have attempted
to reconcile the syntax, but to no avail.

This is my failed attempt:
FOR /R "C:\Users\Jerry Lee\Desktop\test\ESE 211" %G (.) DO (
   md "C:\Users\Jerry Lee\Desktop\test\dogs"
   fsutil hardlink create . *
)

The source HTTrack project is ESE 211; I captured the mirror for this website
and copied over the project itself (.whtt) and the directory containing all of
the website files (this directory is called "ESE 211").  I believe you want me
to utilize a for loop within the batch file to recursively put hard-linked
files in a new directory of my choosing, here called "dogs".  Surely my syntax
is off in some way; any suggestions would be much appreciated.