> The problem:
> Having a Site of Apache-PHP-MySQl-Java-shopping cart. can 
> HTTrack copy the entire site so that I can either place 
it 
> on a cd-rom and run it or install it on a clients 
computer?
It depends.. if the site rely on complex authentication, 
this won't work (such as form+cookie+javascript)

The best is to try ; and if necessary, using the Add 
URL/Capture URL feature.