>After mirroring the website on my (drive C:) and 
>copying the project folder to a CD (Drive e:), it 
>still seems to be looking for the C: Drive where it 
>was originally mirrored. Is there a Local Link 

You did launch the .whtt file, isn't it? Just copy the 
folder, and launch the index.html file

>I also want to use the autorun.inf to refer to the 
>main start window which is an index.htm from a folder 
>within the main site. Any suggestions? 

Try this:

[autorun] 
open=index.html
icon=myicon.ico

But I really don't know is this will work..